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BuildMPIBlastFromSource

Page history last edited by PBworks 12 years, 5 months ago

Here is the procedure I used to build mpiblast from source

 

mpiblast.org instructions

 

Get mpiblast (pick one of these):

 

Get ncbi tollbox (pick one)

 

either

*apt-get install automake1.9

*yum install automake

 

 

tar zxvf mpiblast-latest.tar.gz

tar zxvf ncbi.tar.gz

 

One of

  • patch -p0 < mpiblast/ncbi_May2006_evalue.patch
  • patch -p0 < mpiblast/ncbi_Mar2007_evalue.patch

 

 

ncbi/make/makedis.csh

 

cd mpiblast

aclocal

autoheader

automake -a

autoconf

 

wget http://cvs.savannah.gnu.org/viewvc/*checkout*/config/config/config.sub

wget http://cvs.savannah.gnu.org/viewvc/*checkout*/config/config/config.guess

 

 

./configure --with-ncbi=/full/path/to/ncbi

make

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